Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Tulp3O88413 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tulp3O88413 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tulp3O88413 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.18■□□□□ 0.18
Tulp3O88413 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.18■□□□□ 0.18
Tulp3O88413 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.18■□□□□ 0.18
Tulp3O88413 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tulp3O88413 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tulp3O88413 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.17■□□□□ 0.18
Tulp3O88413 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.17■□□□□ 0.18
Tulp3O88413 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tulp3O88413 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tulp3O88413 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tulp3O88413 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tulp3O88413 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Tulp3O88413 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tulp3O88413 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tulp3O88413 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tulp3O88413 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.15■□□□□ 0.18
Tulp3O88413 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.15■□□□□ 0.18
Tulp3O88413 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tulp3O88413 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tulp3O88413 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tulp3O88413 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tulp3O88413 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Gm2399-201ENSMUST00000104944 225 ntBASIC16.14■□□□□ 0.17
Tulp3O88413 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.14■□□□□ 0.17
Tulp3O88413 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.14■□□□□ 0.17
Tulp3O88413 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.14■□□□□ 0.17
Tulp3O88413 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Tulp3O88413 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tulp3O88413 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tulp3O88413 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tulp3O88413 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tulp3O88413 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms