Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pja1O55176 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pja1O55176 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pja1O55176 Gm13216-201ENSMUST00000117145 591 ntBASIC18.31■□□□□ 0.52
Pja1O55176 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.31■□□□□ 0.52
Pja1O55176 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.31■□□□□ 0.52
Pja1O55176 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pja1O55176 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pja1O55176 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.31■□□□□ 0.52
Pja1O55176 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pja1O55176 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pja1O55176 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Mir5133-201ENSMUST00000174955 77 ntBASIC18.3■□□□□ 0.52
Pja1O55176 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.3■□□□□ 0.52
Pja1O55176 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.3■□□□□ 0.52
Pja1O55176 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.3■□□□□ 0.52
Pja1O55176 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.3■□□□□ 0.52
Pja1O55176 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Pja1O55176 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pja1O55176 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pja1O55176 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.29■□□□□ 0.52
Pja1O55176 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.29■□□□□ 0.52
Pja1O55176 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.29■□□□□ 0.52
Pja1O55176 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pja1O55176 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.29■□□□□ 0.52
Pja1O55176 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.28■□□□□ 0.52
Pja1O55176 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pja1O55176 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pja1O55176 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.28■□□□□ 0.52
Pja1O55176 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Pja1O55176 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pja1O55176 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.27■□□□□ 0.52
Pja1O55176 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Gm10138-203ENSMUST00000206952 366 ntBASIC18.27■□□□□ 0.52
Pja1O55176 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pja1O55176 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pja1O55176 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Pja1O55176 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pja1O55176 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pja1O55176 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.26■□□□□ 0.51
Pja1O55176 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pja1O55176 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.26■□□□□ 0.51
Pja1O55176 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.26■□□□□ 0.51
Pja1O55176 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pja1O55176 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.26■□□□□ 0.51
Pja1O55176 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pja1O55176 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pja1O55176 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms