Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.35■□□□□ 0.85
Slc1a4O35874 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a4O35874 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc1a4O35874 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a4O35874 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a4O35874 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a4O35874 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.34■□□□□ 0.85
Slc1a4O35874 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a4O35874 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.34■□□□□ 0.85
Slc1a4O35874 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc1a4O35874 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc1a4O35874 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a4O35874 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a4O35874 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.33■□□□□ 0.85
Slc1a4O35874 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc1a4O35874 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc1a4O35874 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc1a4O35874 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Slc1a4O35874 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc1a4O35874 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
Slc1a4O35874 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.32■□□□□ 0.84
Slc1a4O35874 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.32■□□□□ 0.84
Slc1a4O35874 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Gm7889-201ENSMUST00000185591 958 ntBASIC20.32■□□□□ 0.84
Slc1a4O35874 Gm37025-201ENSMUST00000195159 829 ntBASIC20.32■□□□□ 0.84
Slc1a4O35874 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc1a4O35874 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Slc1a4O35874 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc1a4O35874 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slc1a4O35874 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc1a4O35874 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.31■□□□□ 0.84
Slc1a4O35874 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc1a4O35874 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.31■□□□□ 0.84
Slc1a4O35874 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc1a4O35874 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Slc1a4O35874 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.3■□□□□ 0.84
Slc1a4O35874 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Slc1a4O35874 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc1a4O35874 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Slc1a4O35874 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc1a4O35874 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slc1a4O35874 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Slc1a4O35874 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc1a4O35874 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.28■□□□□ 0.84
Slc1a4O35874 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Gm7791-201ENSMUST00000219066 539 ntBASIC20.28■□□□□ 0.84
Slc1a4O35874 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc1a4O35874 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc1a4O35874 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.28■□□□□ 0.84
Slc1a4O35874 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc1a4O35874 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc1a4O35874 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc1a4O35874 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc1a4O35874 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms