Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm38188-201ENSMUST00000192879 856 ntBASIC18.42■□□□□ 0.54
Clcn6O35454 Gm19080-201ENSMUST00000196082 550 ntBASIC18.42■□□□□ 0.54
Clcn6O35454 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.42■□□□□ 0.54
Clcn6O35454 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clcn6O35454 Gm19540-201ENSMUST00000221843 810 ntBASIC18.42■□□□□ 0.54
Clcn6O35454 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Clcn6O35454 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clcn6O35454 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn6O35454 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.41■□□□□ 0.54
Clcn6O35454 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn6O35454 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clcn6O35454 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clcn6O35454 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Gm24590-201ENSMUST00000116699 119 ntBASIC18.41■□□□□ 0.54
Clcn6O35454 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC18.41■□□□□ 0.54
Clcn6O35454 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clcn6O35454 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn6O35454 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Mir669o-201ENSMUST00000103898 96 ntBASIC18.4■□□□□ 0.54
Clcn6O35454 Gm37629-201ENSMUST00000193635 1050 ntBASIC18.4■□□□□ 0.54
Clcn6O35454 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC18.4■□□□□ 0.54
Clcn6O35454 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn6O35454 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.4■□□□□ 0.54
Clcn6O35454 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC18.4■□□□□ 0.54
Clcn6O35454 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.4■□□□□ 0.54
Clcn6O35454 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn6O35454 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clcn6O35454 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.4■□□□□ 0.54
Clcn6O35454 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn6O35454 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.39■□□□□ 0.54
Clcn6O35454 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Clcn6O35454 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn6O35454 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn6O35454 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clcn6O35454 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Clcn6O35454 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clcn6O35454 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.39■□□□□ 0.53
Clcn6O35454 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Gm18944-201ENSMUST00000207672 643 ntBASIC18.39■□□□□ 0.53
Clcn6O35454 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.39■□□□□ 0.53
Clcn6O35454 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.39■□□□□ 0.53
Clcn6O35454 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Clcn6O35454 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clcn6O35454 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn6O35454 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clcn6O35454 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Clcn6O35454 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Clcn6O35454 Gm22885-201ENSMUST00000157410 107 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Gm37215-201ENSMUST00000194927 1259 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Gm37709-201ENSMUST00000195074 600 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Gm38018-201ENSMUST00000195651 540 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.38■□□□□ 0.53
Clcn6O35454 Gm45399-201ENSMUST00000209955 1016 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Gm10602-201ENSMUST00000098239 609 ntBASIC18.38■□□□□ 0.53
Clcn6O35454 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clcn6O35454 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Clcn6O35454 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn6O35454 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clcn6O35454 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.37■□□□□ 0.53
Clcn6O35454 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcn6O35454 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms