Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.45■□□□□ 0.06
Alx4O35137 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx4O35137 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Alx4O35137 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Alx4O35137 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Alx4O35137 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.44■□□□□ 0.06
Alx4O35137 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.44■□□□□ 0.06
Alx4O35137 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Alx4O35137 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Alx4O35137 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Alx4O35137 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.43■□□□□ 0.06
Alx4O35137 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Alx4O35137 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.43■□□□□ 0.06
Alx4O35137 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.43■□□□□ 0.06
Alx4O35137 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.43■□□□□ 0.06
Alx4O35137 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx4O35137 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.43■□□□□ 0.06
Alx4O35137 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.42■□□□□ 0.06
Alx4O35137 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Alx4O35137 Mir6349-201ENSMUST00000184059 97 ntBASIC15.42■□□□□ 0.06
Alx4O35137 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Alx4O35137 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.42■□□□□ 0.06
Alx4O35137 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx4O35137 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.41■□□□□ 0.06
Alx4O35137 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Gm11927-201ENSMUST00000118472 759 ntBASIC15.41■□□□□ 0.06
Alx4O35137 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.41■□□□□ 0.06
Alx4O35137 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.41■□□□□ 0.06
Alx4O35137 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.41■□□□□ 0.06
Alx4O35137 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.41■□□□□ 0.06
Alx4O35137 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx4O35137 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.4■□□□□ 0.06
Alx4O35137 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.4■□□□□ 0.06
Alx4O35137 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.4■□□□□ 0.06
Alx4O35137 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Alx4O35137 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Alx4O35137 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx4O35137 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.4■□□□□ 0.06
Alx4O35137 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms