Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.62■□□□□ 0.89
Hdac1O09106 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Hdac1O09106 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Hdac1O09106 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hdac1O09106 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.62■□□□□ 0.89
Hdac1O09106 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.61■□□□□ 0.89
Hdac1O09106 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Gm6576-201ENSMUST00000169678 883 ntBASIC20.61■□□□□ 0.89
Hdac1O09106 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hdac1O09106 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Hdac1O09106 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.61■□□□□ 0.89
Hdac1O09106 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.61■□□□□ 0.89
Hdac1O09106 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac1O09106 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hdac1O09106 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hdac1O09106 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Hdac1O09106 Gm42569-201ENSMUST00000200539 472 ntBASIC20.6■□□□□ 0.89
Hdac1O09106 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.6■□□□□ 0.89
Hdac1O09106 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac1O09106 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Gm15375-201ENSMUST00000119510 849 ntBASIC20.59■□□□□ 0.89
Hdac1O09106 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.59■□□□□ 0.89
Hdac1O09106 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hdac1O09106 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.59■□□□□ 0.89
Hdac1O09106 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac1O09106 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.58■□□□□ 0.89
Hdac1O09106 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Mir5133-201ENSMUST00000174955 77 ntBASIC20.58■□□□□ 0.89
Hdac1O09106 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac1O09106 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac1O09106 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Hdac1O09106 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.57■□□□□ 0.88
Hdac1O09106 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.57■□□□□ 0.88
Hdac1O09106 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hdac1O09106 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac1O09106 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms