Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trove2O08848 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.77■□□□□ 0.44
Trove2O08848 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
Trove2O08848 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Trove2O08848 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trove2O08848 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trove2O08848 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.76■□□□□ 0.43
Trove2O08848 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.76■□□□□ 0.43
Trove2O08848 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.76■□□□□ 0.43
Trove2O08848 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trove2O08848 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.76■□□□□ 0.43
Trove2O08848 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.76■□□□□ 0.43
Trove2O08848 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.76■□□□□ 0.43
Trove2O08848 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trove2O08848 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trove2O08848 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trove2O08848 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Trove2O08848 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.75■□□□□ 0.43
Trove2O08848 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.75■□□□□ 0.43
Trove2O08848 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.75■□□□□ 0.43
Trove2O08848 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trove2O08848 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Trove2O08848 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.74■□□□□ 0.43
Trove2O08848 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.74■□□□□ 0.43
Trove2O08848 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.74■□□□□ 0.43
Trove2O08848 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.74■□□□□ 0.43
Trove2O08848 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.74■□□□□ 0.43
Trove2O08848 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trove2O08848 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trove2O08848 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.73■□□□□ 0.43
Trove2O08848 Gm27405-201ENSMUST00000184201 112 ntBASIC17.73■□□□□ 0.43
Trove2O08848 Gm6365-201ENSMUST00000054711 744 ntBASIC17.73■□□□□ 0.43
Trove2O08848 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trove2O08848 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trove2O08848 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trove2O08848 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms