Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tcof1O08784 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.26■□□□□ 0.83
Tcof1O08784 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tcof1O08784 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.26■□□□□ 0.83
Tcof1O08784 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.26■□□□□ 0.83
Tcof1O08784 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcof1O08784 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.25■□□□□ 0.83
Tcof1O08784 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcof1O08784 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.25■□□□□ 0.83
Tcof1O08784 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcof1O08784 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tcof1O08784 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tcof1O08784 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.24■□□□□ 0.83
Tcof1O08784 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tcof1O08784 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.24■□□□□ 0.83
Tcof1O08784 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.24■□□□□ 0.83
Tcof1O08784 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.24■□□□□ 0.83
Tcof1O08784 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.24■□□□□ 0.83
Tcof1O08784 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcof1O08784 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.24■□□□□ 0.83
Tcof1O08784 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tcof1O08784 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.23■□□□□ 0.83
Tcof1O08784 Gm37025-201ENSMUST00000195159 829 ntBASIC20.23■□□□□ 0.83
Tcof1O08784 Gm9731-201ENSMUST00000209480 747 ntBASIC20.23■□□□□ 0.83
Tcof1O08784 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Tcof1O08784 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.23■□□□□ 0.83
Tcof1O08784 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Tcof1O08784 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tcof1O08784 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.22■□□□□ 0.83
Tcof1O08784 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Tcof1O08784 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tcof1O08784 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.22■□□□□ 0.83
Tcof1O08784 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tcof1O08784 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tcof1O08784 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Tcof1O08784 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcof1O08784 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.21■□□□□ 0.83
Tcof1O08784 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.21■□□□□ 0.83
Tcof1O08784 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Tcof1O08784 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.21■□□□□ 0.83
Tcof1O08784 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.21■□□□□ 0.83
Tcof1O08784 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcof1O08784 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tcof1O08784 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tcof1O08784 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.2■□□□□ 0.82
Tcof1O08784 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcof1O08784 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tcof1O08784 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Tcof1O08784 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tcof1O08784 Gm17661-201ENSMUST00000170317 270 ntBASIC20.19■□□□□ 0.82
Tcof1O08784 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms