Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm17535J3KMR8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm17535J3KMR8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Gm10013-201ENSMUST00000106074 672 ntBASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Gm22697-201ENSMUST00000175194 63 ntBASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm17535J3KMR8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm17535J3KMR8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm17535J3KMR8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm17535J3KMR8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Gm7213-201ENSMUST00000215977 950 ntBASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm17535J3KMR8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.38■□□□□ 0.53
Gm17535J3KMR8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Mir1668-201ENSMUST00000184114 107 ntBASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Gm18101-201ENSMUST00000215769 548 ntBASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gm17535J3KMR8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm17535J3KMR8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm17535J3KMR8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms