Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh9F8VPK8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdh9F8VPK8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdh9F8VPK8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh9F8VPK8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh9F8VPK8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh9F8VPK8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh9F8VPK8 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh9F8VPK8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdh9F8VPK8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Gm12896-201ENSMUST00000118430 226 ntBASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh9F8VPK8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms