Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh1F7BJK1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh1F7BJK1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh1F7BJK1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh1F7BJK1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh1F7BJK1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh1F7BJK1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm10849-201ENSMUST00000100397 618 ntBASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm13401-201ENSMUST00000117074 291 ntBASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm6365-201ENSMUST00000054711 744 ntBASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh1F7BJK1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh1F7BJK1 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Gm26571-201ENSMUST00000181399 666 ntBASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh1F7BJK1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms