Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28305F6U473 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Gm28305F6U473 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28305F6U473 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28305F6U473 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28305F6U473 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm28305F6U473 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.82□□□□□ -0.36
Gm28305F6U473 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm28305F6U473 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28305F6U473 Tgds-204ENSMUST00000228543 1594 ntBASIC12.81□□□□□ -0.36
Gm28305F6U473 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Gm28305F6U473 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28305F6U473 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Gm28305F6U473 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.81□□□□□ -0.36
Gm28305F6U473 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm28305F6U473 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28305F6U473 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28305F6U473 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.8□□□□□ -0.36
Gm28305F6U473 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.8□□□□□ -0.36
Gm28305F6U473 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm28305F6U473 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28305F6U473 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm28305F6U473 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.79□□□□□ -0.36
Gm28305F6U473 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28305F6U473 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms