Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.83■□□□□ 0.93
Ube4aE9Q735 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ube4aE9Q735 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ube4aE9Q735 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.83■□□□□ 0.92
Ube4aE9Q735 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ube4aE9Q735 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ube4aE9Q735 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ube4aE9Q735 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ube4aE9Q735 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.82■□□□□ 0.92
Ube4aE9Q735 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ube4aE9Q735 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Mir770-201ENSMUST00000103252 94 ntBASIC20.81■□□□□ 0.92
Ube4aE9Q735 Gm6623-201ENSMUST00000173570 544 ntBASIC20.81■□□□□ 0.92
Ube4aE9Q735 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.81■□□□□ 0.92
Ube4aE9Q735 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4aE9Q735 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.81■□□□□ 0.92
Ube4aE9Q735 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Gm17807-201ENSMUST00000186869 298 ntBASIC20.8■□□□□ 0.92
Ube4aE9Q735 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4aE9Q735 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ube4aE9Q735 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.79■□□□□ 0.92
Ube4aE9Q735 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Gm27000-201ENSMUST00000182943 842 ntBASIC20.79■□□□□ 0.92
Ube4aE9Q735 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4aE9Q735 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4aE9Q735 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.77■□□□□ 0.92
Ube4aE9Q735 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Gm28033-201ENSMUST00000184224 96 ntBASIC20.77■□□□□ 0.92
Ube4aE9Q735 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.77■□□□□ 0.92
Ube4aE9Q735 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms