Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdh17E9PXF0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh17E9PXF0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh17E9PXF0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.08■□□□□ 0.17
Pcdh17E9PXF0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.08■□□□□ 0.17
Pcdh17E9PXF0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdh17E9PXF0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh17E9PXF0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Gm24841-201ENSMUST00000158676 357 ntBASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Fst-202ENSMUST00000223640 2612 ntBASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh17E9PXF0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh17E9PXF0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh17E9PXF0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms