Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Mir5133-201ENSMUST00000174955 77 ntBASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5580A0A0N4SVP8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5580A0A0N4SVP8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5580A0A0N4SVP8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5580A0A0N4SVP8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm10602-201ENSMUST00000098239 609 ntBASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5580A0A0N4SVP8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.84■□□□□ 0.61
Gm5580A0A0N4SVP8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm5580A0A0N4SVP8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5580A0A0N4SVP8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5580A0A0N4SVP8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm5580A0A0N4SVP8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.83■□□□□ 0.61
Gm5580A0A0N4SVP8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm5580A0A0N4SVP8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms