Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm6139-201ENSMUST00000079261 882 ntBASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm27454-201ENSMUST00000185090 204 ntBASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms