Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4-3A0A0B4J1K1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4-3A0A0B4J1K1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4-3A0A0B4J1K1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4-3A0A0B4J1K1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4-3A0A0B4J1K1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm38205-201ENSMUST00000192243 258 ntBASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4-3A0A0B4J1K1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Smad6-203ENSMUST00000179458 273 ntBASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4-3A0A0B4J1K1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms