Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Tcrg-V4A0A0B4J1J8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.02□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms