Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv20A0A0B4J1H5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm43060-201ENSMUST00000200621 289 ntBASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm9988-201ENSMUST00000069786 435 ntBASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm6139-201ENSMUST00000079261 882 ntBASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv20A0A0B4J1H5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv20A0A0B4J1H5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv20A0A0B4J1H5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv20A0A0B4J1H5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm13241-201ENSMUST00000094493 780 ntBASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms