Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv5A0A0B4J1G9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbv5A0A0B4J1G9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm22325-201ENSMUST00000158904 308 ntBASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv5A0A0B4J1G9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv5A0A0B4J1G9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv5A0A0B4J1G9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.94□□□□□ -0.18
Trbv5A0A0B4J1G9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms