Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.39□□□□□ -0.27
Trbv3A0A0A6YYE2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.39□□□□□ -0.27
Trbv3A0A0A6YYE2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv3A0A0A6YYE2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv3A0A0A6YYE2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv3A0A0A6YYE2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm8493-201ENSMUST00000196881 489 ntBASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trbv3A0A0A6YYE2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm10418-201ENSMUST00000100943 576 ntBASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv3A0A0A6YYE2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Rps24-207ENSMUST00000224568 714 ntBASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv3A0A0A6YYE2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm43060-201ENSMUST00000200621 289 ntBASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms