Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-42A0A0A6YY38 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm26039-201ENSMUST00000158152 144 ntBASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-42A0A0A6YY38 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm18958-201ENSMUST00000174258 762 ntBASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-42A0A0A6YY38 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Actl10-202ENSMUST00000226583 1501 ntBASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-42A0A0A6YY38 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.96■□□□□ 0.14
Ighv1-42A0A0A6YY38 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-42A0A0A6YY38 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ighv1-42A0A0A6YY38 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms