Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm6420-201ENSMUST00000193885 723 ntBASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Nespas-201ENSMUST00000143738 1083 ntBASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6d-5A0A075B6B9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Gm45417-201ENSMUST00000209533 758 ntBASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6d-5A0A075B6B9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6d-5A0A075B6B9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6d-5A0A075B6B9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms