Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-1A0A075B699 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-1A0A075B699 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-1A0A075B699 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-1A0A075B699 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav9d-1A0A075B699 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Rab3c-203ENSMUST00000224180 967 ntBASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav9d-1A0A075B699 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Mtag2-201ENSMUST00000058665 714 ntBASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav9d-1A0A075B699 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Gm5408-201ENSMUST00000197998 747 ntBASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-1A0A075B699 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-1A0A075B699 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms