Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdv1A0A075B657 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdv1A0A075B657 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trdv1A0A075B657 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Gm2399-201ENSMUST00000104944 225 ntBASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdv1A0A075B657 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trdv1A0A075B657 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv1A0A075B657 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms