Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-7-dv9A0A075B639 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gm12382-201ENSMUST00000122005 922 ntBASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-7-dv9A0A075B639 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Trmt13-210ENSMUST00000198454 880 ntBASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-7-dv9A0A075B639 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-7-dv9A0A075B639 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-7-dv9A0A075B639 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-7-dv9A0A075B639 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-7-dv9A0A075B639 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm42545-201ENSMUST00000202755 922 ntBASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms