Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav4-2A0A075B638 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4-2A0A075B638 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Gm6139-201ENSMUST00000079261 882 ntBASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Gm13241-201ENSMUST00000094493 780 ntBASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Reep4-203ENSMUST00000226563 1444 ntBASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4-2A0A075B638 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4-2A0A075B638 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-2A0A075B638 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.71□□□□□ -0.22
Trav4-2A0A075B638 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-2A0A075B638 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4-2A0A075B638 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Gm9988-201ENSMUST00000069786 435 ntBASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms