Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7n-4A0A075B620 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Trav7n-4A0A075B620 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gm9959-201ENSMUST00000068277 390 ntBASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7n-4A0A075B620 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gm43137-201ENSMUST00000198052 594 ntBASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav7n-4A0A075B620 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7n-4A0A075B620 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms