Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16d-dv11A0A075B617 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16d-dv11A0A075B617 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16d-dv11A0A075B617 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms