Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13d-1A0A075B606 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav13d-1A0A075B606 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav13d-1A0A075B606 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13d-1A0A075B606 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms