Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-1A0A075B5Z8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm44549-201ENSMUST00000208351 577 ntBASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-1A0A075B5Z8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm7290-201ENSMUST00000104990 617 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm12918-201ENSMUST00000120234 636 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm15710-201ENSMUST00000121821 636 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm5075-201ENSMUST00000196916 622 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm7291-201ENSMUST00000199147 382 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm6365-201ENSMUST00000054711 744 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-1A0A075B5Z8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-1A0A075B5Z8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-1A0A075B5Z8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms