Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm14771-201ENSMUST00000118249 203 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Gm24675-201ENSMUST00000158757 259 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Gm19193-201ENSMUST00000190263 590 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim41Q5NCC3 AC121870.1-201ENSMUST00000216279 4879 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Gm37887-201ENSMUST00000192752 2716 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim41Q5NCC3 AC152944.1-201ENSMUST00000220160 3101 ntBASIC9.27□□□□□ -0.93
Trim41Q5NCC3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm22758-201ENSMUST00000102275 96 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm22831-201ENSMUST00000102473 109 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm14622-201ENSMUST00000117117 468 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm11196-201ENSMUST00000119052 395 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm4842-201ENSMUST00000183237 835 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm29479-201ENSMUST00000190352 455 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm36983-201ENSMUST00000192280 1102 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm2979-201ENSMUST00000193442 463 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm43428-201ENSMUST00000200108 3845 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm22571-201ENSMUST00000082984 70 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm23721-201ENSMUST00000083005 107 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Mir496a-201ENSMUST00000093627 79 ntBASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim41Q5NCC3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm15297-201ENSMUST00000117795 290 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 n-R5s174-201ENSMUST00000122638 121 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm23167-201ENSMUST00000157155 103 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm25865-201ENSMUST00000158247 104 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm23860-201ENSMUST00000179446 132 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm24518-201ENSMUST00000180275 94 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm28534-201ENSMUST00000187744 676 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 AC129202.3-201ENSMUST00000224413 733 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 AC165138.1-201ENSMUST00000226984 270 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm23972-201ENSMUST00000083322 165 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Gm44801-201ENSMUST00000207644 2060 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim41Q5NCC3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm37064-201ENSMUST00000193851 2231 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm15026-201ENSMUST00000119219 458 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm13009-201ENSMUST00000121307 267 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm11931-201ENSMUST00000121630 447 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm24186-201ENSMUST00000157983 127 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm37878-201ENSMUST00000192108 387 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm43855-201ENSMUST00000197462 507 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm42579-201ENSMUST00000200512 734 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 AC093926.1-201ENSMUST00000213730 243 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm18016-201ENSMUST00000216119 801 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 AC158803.3-201ENSMUST00000220024 211 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm7040-201ENSMUST00000223271 443 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 CT030195.1-201ENSMUST00000223887 378 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Gm22220-201ENSMUST00000082671 149 ntBASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim41Q5NCC3 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 209.7 ms