Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14753-201ENSMUST00000118503 246 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm14688-201ENSMUST00000119169 303 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm11325-201ENSMUST00000119967 469 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm14656-201ENSMUST00000120342 502 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm25428-201ENSMUST00000157608 114 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm27999-201ENSMUST00000183539 193 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Mir6414-201ENSMUST00000183685 82 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Mir6401-201ENSMUST00000184499 109 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm18177-201ENSMUST00000188373 404 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm43601-201ENSMUST00000196294 945 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm44274-201ENSMUST00000203417 256 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm44858-201ENSMUST00000207360 154 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm20102-201ENSMUST00000222445 220 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm24042-201ENSMUST00000083114 103 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm25595-201ENSMUST00000102273 97 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm15357-201ENSMUST00000119160 285 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm11794-201ENSMUST00000119446 237 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm14240-201ENSMUST00000120353 546 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm21991-201ENSMUST00000180006 508 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm22307-201ENSMUST00000180019 107 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm3145-201ENSMUST00000188584 220 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm42828-201ENSMUST00000199669 469 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm45173-201ENSMUST00000206819 305 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a1Q04857 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a1Q04857 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a1Q04857 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a1Q04857 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Col6a1Q04857 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a1Q04857 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a1Q04857 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm24683-201ENSMUST00000104840 88 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm14878-201ENSMUST00000118167 293 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm12646-201ENSMUST00000119144 238 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm22204-201ENSMUST00000122654 327 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm22597-201ENSMUST00000157602 80 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm22940-201ENSMUST00000158560 155 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm8649-201ENSMUST00000181799 233 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm27694-201ENSMUST00000184740 86 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms