Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Chd6A3KFM7 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Chd6A3KFM7 Gm22852-201ENSMUST00000177899 101 ntBASIC2.47□□□□□ -2.01
Chd6A3KFM7 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Chd6A3KFM7 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Chd6A3KFM7 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.47□□□□□ -2.01
Chd6A3KFM7 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.47□□□□□ -2.01
Chd6A3KFM7 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.47□□□□□ -2.01
Chd6A3KFM7 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.47□□□□□ -2.01
Chd6A3KFM7 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.47□□□□□ -2.01
Chd6A3KFM7 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm8430-201ENSMUST00000119780 471 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm14065-201ENSMUST00000120848 585 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm25967-201ENSMUST00000157168 147 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm24879-201ENSMUST00000158386 143 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm43491-201ENSMUST00000197133 784 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm43746-201ENSMUST00000200028 317 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm45474-201ENSMUST00000209471 408 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm16274-201ENSMUST00000139251 592 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm38081-201ENSMUST00000192680 1645 ntBASIC2.46□□□□□ -2.02
Chd6A3KFM7 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC2.46□□□□□ -2.02
Chd6A3KFM7 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm12568-201ENSMUST00000117362 624 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm13379-201ENSMUST00000118053 621 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm13555-201ENSMUST00000121668 319 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm10075-201ENSMUST00000162030 545 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm5527-201ENSMUST00000179821 642 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm8319-201ENSMUST00000205708 641 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm44712-201ENSMUST00000206250 1076 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 AC159256.1-201ENSMUST00000224298 1039 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm24120-201ENSMUST00000103978 129 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm7974-201ENSMUST00000117154 408 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm7327-201ENSMUST00000120925 652 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm16327-201ENSMUST00000137146 228 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm46138-201ENSMUST00000215294 426 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm46389-201ENSMUST00000223199 392 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.45□□□□□ -2.02
Chd6A3KFM7 Gm9314-201ENSMUST00000199881 1528 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm25116-201ENSMUST00000157191 122 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm22214-201ENSMUST00000157563 172 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm16101-201ENSMUST00000160695 430 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm42666-201ENSMUST00000201954 152 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm7117-201ENSMUST00000071515 387 ntBASIC2.44□□□□□ -2.02
Chd6A3KFM7 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Chd6A3KFM7 Gm23136-201ENSMUST00000083425 99 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms