Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm9225-201ENSMUST00000121921 836 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm15899-201ENSMUST00000128586 238 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm22816-201ENSMUST00000157450 117 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm26402-201ENSMUST00000158499 113 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm23024-201ENSMUST00000158770 292 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm16134-201ENSMUST00000161714 336 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Mir5134-201ENSMUST00000175529 78 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm27599-201ENSMUST00000183758 174 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm28660-201ENSMUST00000186496 253 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm44092-201ENSMUST00000204470 258 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm45023-201ENSMUST00000207951 379 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.94□□□□□ -1.62
Sox9Q04887 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox9Q04887 Ear14-201ENSMUST00000049559 468 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm9845-201ENSMUST00000056409 598 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox9Q04887 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.94□□□□□ -1.62
Sox9Q04887 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Sox9Q04887 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox9Q04887 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Sox9Q04887 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Sox9Q04887 Gm10552-201ENSMUST00000113396 372 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm15175-201ENSMUST00000117629 132 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm11409-201ENSMUST00000118621 403 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm13132-201ENSMUST00000121194 472 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.93□□□□□ -1.62
Sox9Q04887 Gm25970-201ENSMUST00000157165 86 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm25909-201ENSMUST00000157619 121 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm24751-201ENSMUST00000157844 102 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm23781-201ENSMUST00000157940 308 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm24853-201ENSMUST00000158026 121 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm25365-201ENSMUST00000158852 121 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm5263-201ENSMUST00000163646 601 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm27660-201ENSMUST00000184028 208 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm38011-201ENSMUST00000193312 279 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm8874-201ENSMUST00000196826 286 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox9Q04887 Gm44059-201ENSMUST00000204048 351 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm7039-201ENSMUST00000205138 346 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm45590-201ENSMUST00000209715 262 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm45857-201ENSMUST00000212207 356 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Sox9Q04887 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Sox9Q04887 Gm25079-201ENSMUST00000082529 203 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm24166-201ENSMUST00000082724 135 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm22364-201ENSMUST00000083097 98 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Mir338-201ENSMUST00000083666 98 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Sox9Q04887 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox9Q04887 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.93□□□□□ -1.62
Sox9Q04887 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Sox9Q04887 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox9Q04887 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm25169-201ENSMUST00000104190 129 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm16428-201ENSMUST00000121193 723 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm24635-201ENSMUST00000122712 128 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm25907-201ENSMUST00000158486 125 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm17538-201ENSMUST00000168236 327 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.92□□□□□ -1.62
Sox9Q04887 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sox9Q04887 Gm26335-201ENSMUST00000178449 107 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms