Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Sox1P53783 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.28□□□□□ -1.56
Sox1P53783 Gm10552-201ENSMUST00000113396 372 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm15752-201ENSMUST00000117427 394 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm14107-201ENSMUST00000117774 330 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm6071-201ENSMUST00000119561 440 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.28□□□□□ -1.56
Sox1P53783 Gm23411-201ENSMUST00000157988 62 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm27579-201ENSMUST00000158113 63 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm26170-201ENSMUST00000158419 148 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm16569-201ENSMUST00000160526 314 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm27803-201ENSMUST00000183763 119 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm37817-201ENSMUST00000195276 434 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm19739-201ENSMUST00000195941 153 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm5552-201ENSMUST00000197149 515 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm43739-201ENSMUST00000198294 307 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm44523-201ENSMUST00000205616 417 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm45150-201ENSMUST00000206051 467 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm44609-201ENSMUST00000207157 460 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Gm26447-201ENSMUST00000082448 129 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Sox1P53783 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Sox1P53783 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Sox1P53783 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.28□□□□□ -1.56
Sox1P53783 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox1P53783 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox1P53783 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.27□□□□□ -1.57
Sox1P53783 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 Mir711-201ENSMUST00000102188 82 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm13239-201ENSMUST00000119920 637 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm26102-201ENSMUST00000157251 284 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm24689-201ENSMUST00000157760 104 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Mir1945-201ENSMUST00000157919 78 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm15796-201ENSMUST00000162135 204 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm24100-201ENSMUST00000178592 79 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm23860-201ENSMUST00000179446 132 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm22633-201ENSMUST00000179834 107 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm24137-201ENSMUST00000180055 79 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm22391-201ENSMUST00000180356 79 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Mir6416-201ENSMUST00000183664 117 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm2497-201ENSMUST00000189539 601 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm8599-201ENSMUST00000193033 457 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm28724-202ENSMUST00000194218 295 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm3010-201ENSMUST00000198805 448 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm4734-201ENSMUST00000200117 777 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm45508-201ENSMUST00000209298 299 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Gm19326-201ENSMUST00000219818 326 ntBASIC5.27□□□□□ -1.57
Sox1P53783 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.27□□□□□ -1.57
Sox1P53783 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.27□□□□□ -1.57
Sox1P53783 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox1P53783 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox1P53783 Gm23412-201ENSMUST00000083017 107 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.27□□□□□ -1.57
Sox1P53783 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.27□□□□□ -1.57
Sox1P53783 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Sox1P53783 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox1P53783 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Sox1P53783 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms