Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm14897-201ENSMUST00000118213 207 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm15480-201ENSMUST00000120442 519 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Mir5103-201ENSMUST00000175111 79 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm22355-201ENSMUST00000175531 96 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Trbv28-201ENSMUST00000192804 264 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Mir142-201ENSMUST00000198092 64 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm43559-201ENSMUST00000198755 466 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm3010-201ENSMUST00000198805 448 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm45522-201ENSMUST00000210784 166 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 AC174457.1-201ENSMUST00000215932 226 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm3213-201ENSMUST00000219296 441 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm4036-201ENSMUST00000220842 626 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Mir129-2-201ENSMUST00000083577 90 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Gm3584-201ENSMUST00000173822 2565 ntBASIC1.98□□□□□ -2.09
Trav4n-4A0A075B615 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 AC125223.3-201ENSMUST00000223588 2067 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm20345-201ENSMUST00000175839 2414 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm15018-201ENSMUST00000117090 633 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm14578-201ENSMUST00000122166 391 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm7209-201ENSMUST00000122339 333 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm22107-201ENSMUST00000122548 100 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm24475-201ENSMUST00000157435 143 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm23450-201ENSMUST00000178285 91 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm26866-201ENSMUST00000180414 802 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 S100a11-ps-201ENSMUST00000181735 306 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm37417-201ENSMUST00000195257 454 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm18429-201ENSMUST00000198707 421 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm44355-201ENSMUST00000200417 104 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm44184-201ENSMUST00000204290 132 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm19599-201ENSMUST00000218898 358 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 AC122484.1-201ENSMUST00000221578 177 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 AC154198.1-201ENSMUST00000222839 424 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 AC131029.2-202ENSMUST00000228430 496 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.97□□□□□ -2.09
Trav4n-4A0A075B615 Gm43300-201ENSMUST00000198540 2043 ntBASIC1.96□□□□□ -2.09
Trav4n-4A0A075B615 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm14512-201ENSMUST00000117924 230 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm14647-201ENSMUST00000119392 680 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm11625-201ENSMUST00000119535 296 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm14506-201ENSMUST00000121165 536 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm6155-201ENSMUST00000173735 341 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm26141-201ENSMUST00000175299 126 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Mir6410-201ENSMUST00000184204 104 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm17916-202ENSMUST00000187634 1187 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm36985-201ENSMUST00000195595 379 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm42593-201ENSMUST00000198469 377 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm42502-201ENSMUST00000198550 1089 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.96□□□□□ -2.1
Trav4n-4A0A075B615 Gm19244-201ENSMUST00000204340 253 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms