Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm7609-204ENSMUST00000161424 461 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Mir3964-201ENSMUST00000174898 74 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm29454-201ENSMUST00000190805 393 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm7040-201ENSMUST00000223271 443 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 AC112935.1-201ENSMUST00000227603 250 ntBASIC6.01□□□□□ -1.45
Trim47Q8C0E3 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim47Q8C0E3 Gm38351-201ENSMUST00000195466 2518 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim47Q8C0E3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Trim47Q8C0E3 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim47Q8C0E3 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim47Q8C0E3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim47Q8C0E3 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm14622-201ENSMUST00000117117 468 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm14823-201ENSMUST00000117698 238 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm14512-201ENSMUST00000117924 230 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm15803-201ENSMUST00000120118 394 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm14915-201ENSMUST00000120747 204 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm24240-201ENSMUST00000157785 135 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm22633-201ENSMUST00000179834 107 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm24518-201ENSMUST00000180275 94 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm38044-201ENSMUST00000192964 487 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm43529-201ENSMUST00000199178 412 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 AC125374.2-201ENSMUST00000214278 162 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 AC155808.1-201ENSMUST00000219288 409 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6□□□□□ -1.45
Trim47Q8C0E3 CT030182.2-201ENSMUST00000223569 620 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm7808-201ENSMUST00000082002 387 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm26439-201ENSMUST00000082592 106 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm23939-201ENSMUST00000082880 133 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm25139-201ENSMUST00000083247 210 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Gm44801-201ENSMUST00000207644 2060 ntBASIC6□□□□□ -1.45
Trim47Q8C0E3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim47Q8C0E3 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Trim47Q8C0E3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm15026-201ENSMUST00000119219 458 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm7327-201ENSMUST00000120925 652 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Scarna13-201ENSMUST00000158164 275 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Mir3080-201ENSMUST00000175010 79 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm5139-201ENSMUST00000175943 249 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm28967-201ENSMUST00000187351 281 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm37568-201ENSMUST00000191755 364 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Mir6516-201ENSMUST00000196236 110 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm5457-201ENSMUST00000022260 333 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm6474-201ENSMUST00000223250 699 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm26263-201ENSMUST00000083281 164 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm9386-201ENSMUST00000095195 381 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.99□□□□□ -1.45
Trim47Q8C0E3 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Mir1188-201ENSMUST00000116756 120 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm16017-201ENSMUST00000119834 208 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm25176-201ENSMUST00000122640 125 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Scarna10-201ENSMUST00000158992 325 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms