Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm24670-201ENSMUST00000104154 132 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm7327-201ENSMUST00000120925 652 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm8880-201ENSMUST00000121800 454 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm15022-201ENSMUST00000122074 746 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm15212-201ENSMUST00000122403 466 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm22600-201ENSMUST00000157598 269 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm27369-201ENSMUST00000185182 71 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm43427-201ENSMUST00000198188 331 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Col6a5A6H584 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.32□□□□□ -2.04
Col6a5A6H584 AC158523.1-201ENSMUST00000221398 328 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm23927-201ENSMUST00000082466 215 ntBASIC2.32□□□□□ -2.04
Col6a5A6H584 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col6a5A6H584 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col6a5A6H584 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm43319-201ENSMUST00000198036 2270 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm381-201ENSMUST00000117443 2037 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm7422-201ENSMUST00000220115 640 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm12568-201ENSMUST00000117362 624 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm13379-201ENSMUST00000118053 621 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm12118-201ENSMUST00000119766 532 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm13438-201ENSMUST00000120100 573 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm9435-201ENSMUST00000120379 877 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm10075-201ENSMUST00000162030 545 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm5527-201ENSMUST00000179821 642 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm8874-201ENSMUST00000196826 286 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm8319-201ENSMUST00000205708 641 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Mir28a-201ENSMUST00000083560 86 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 n-R5s182-201ENSMUST00000083889 107 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a5A6H584 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.31□□□□□ -2.04
Col6a5A6H584 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm15399-201ENSMUST00000118055 724 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Trbv10-201ENSMUST00000168322 289 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm8807-201ENSMUST00000179328 492 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm37377-201ENSMUST00000191733 304 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a5A6H584 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm35405-201ENSMUST00000218754 400 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm5374-201ENSMUST00000222868 657 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm26121-201ENSMUST00000083364 162 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
Col6a5A6H584 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm28362-201ENSMUST00000189430 2420 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm15021-201ENSMUST00000117832 742 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a5A6H584 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm43369-201ENSMUST00000196373 1552 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.3□□□□□ -2.04
Col6a5A6H584 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.29□□□□□ -2.04
Col6a5A6H584 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a5A6H584 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a5A6H584 Gm12513-201ENSMUST00000118617 352 ntBASIC2.29□□□□□ -2.04
Col6a5A6H584 Gm14607-201ENSMUST00000119119 491 ntBASIC2.29□□□□□ -2.04
Col6a5A6H584 Gm8244-201ENSMUST00000121254 264 ntBASIC2.29□□□□□ -2.04
Col6a5A6H584 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms