Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm6265-201ENSMUST00000149263 231 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm23277-201ENSMUST00000157914 136 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm24675-201ENSMUST00000158757 259 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm26287-201ENSMUST00000158887 81 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm24179-201ENSMUST00000158925 127 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm17187-201ENSMUST00000164622 410 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm28385-201ENSMUST00000185671 292 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm9402-201ENSMUST00000196849 388 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm16419-201ENSMUST00000221057 625 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm9292-201ENSMUST00000222008 710 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm9293-201ENSMUST00000223096 306 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.57□□□□□ -1.52
Nubp1Q9R060 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.57□□□□□ -1.52
Nubp1Q9R060 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm11673-201ENSMUST00000117846 331 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm7657-201ENSMUST00000118851 666 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm12820-201ENSMUST00000119233 342 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm10319-202ENSMUST00000159439 846 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm29484-201ENSMUST00000186067 324 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm43724-201ENSMUST00000197516 226 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm42643-201ENSMUST00000200504 279 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC5.56□□□□□ -1.52
Nubp1Q9R060 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nubp1Q9R060 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms