Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.62□□□□□ -1.51
Clp1Q99LI9 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.62□□□□□ -1.51
Clp1Q99LI9 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Clp1Q99LI9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm22020-201ENSMUST00000104358 136 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm24469-201ENSMUST00000104487 131 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm11577-201ENSMUST00000118030 737 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm13491-201ENSMUST00000118267 235 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm14008-201ENSMUST00000120483 274 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm15786-201ENSMUST00000121079 450 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm12226-201ENSMUST00000144172 876 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm22849-201ENSMUST00000157713 307 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm26189-201ENSMUST00000179879 107 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm26970-201ENSMUST00000182990 964 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm28769-201ENSMUST00000190176 615 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm21088-201ENSMUST00000190875 316 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm37692-201ENSMUST00000192633 232 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm42665-201ENSMUST00000202100 586 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm5322-201ENSMUST00000206142 699 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm19786-201ENSMUST00000222589 580 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm6988-201ENSMUST00000222676 375 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.61□□□□□ -1.51
Clp1Q99LI9 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Clp1Q99LI9 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm24951-201ENSMUST00000102182 109 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm12328-201ENSMUST00000118611 197 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm13510-201ENSMUST00000118659 429 ntBASIC5.6□□□□□ -1.51
Clp1Q99LI9 Gm14761-201ENSMUST00000121363 262 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms