Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Npn2-202ENSMUST00000189275 235 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm37732-201ENSMUST00000194377 316 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 Neat1-201ENSMUST00000173672 20771 ntBASIC4.57□□□□□ -1.68
Rnf220Q6PDX6 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm11813-201ENSMUST00000118586 291 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm22452-201ENSMUST00000122804 104 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm23124-201ENSMUST00000157650 107 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm5258-201ENSMUST00000165437 327 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm26335-201ENSMUST00000178449 107 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm10784-201ENSMUST00000178715 238 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm28779-201ENSMUST00000189678 323 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm18306-201ENSMUST00000207338 569 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm8249-201ENSMUST00000219225 465 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm8274-201ENSMUST00000219820 463 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm25260-201ENSMUST00000083053 134 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Rnf220Q6PDX6 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm11486-201ENSMUST00000107322 478 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm14975-201ENSMUST00000118741 664 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm14049-201ENSMUST00000121009 636 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm12422-201ENSMUST00000121431 302 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm24719-201ENSMUST00000157520 110 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm24636-201ENSMUST00000158673 288 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm3191-201ENSMUST00000167139 346 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm27854-201ENSMUST00000175578 244 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm24100-201ENSMUST00000178592 79 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm24137-201ENSMUST00000180055 79 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm22391-201ENSMUST00000180356 79 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm18505-201ENSMUST00000187360 790 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm18291-201ENSMUST00000190791 301 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm34015-201ENSMUST00000194908 451 ntBASIC4.55□□□□□ -1.68
Rnf220Q6PDX6 Gm19089-201ENSMUST00000197207 613 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms