Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25454-201ENSMUST00000157947 315 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20545-201ENSMUST00000174739 210 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm29596-201ENSMUST00000185710 385 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm5284-201ENSMUST00000199053 903 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43418-201ENSMUST00000201334 428 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44083-201ENSMUST00000203114 337 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44307-201ENSMUST00000204466 764 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm19256-201ENSMUST00000218550 231 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm9318-201ENSMUST00000222444 438 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm26447-201ENSMUST00000082448 129 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm24316-201ENSMUST00000083041 107 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sh3rf1Q69ZI1 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13880-201ENSMUST00000118421 474 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm2005-201ENSMUST00000120759 542 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11677-201ENSMUST00000121349 977 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm25430-201ENSMUST00000157614 289 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm25603-201ENSMUST00000158361 105 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm20415-201ENSMUST00000172877 423 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm22348-201ENSMUST00000178674 79 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm14527-201ENSMUST00000179300 639 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm27820-201ENSMUST00000183628 175 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18728-201ENSMUST00000186155 753 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28717-201ENSMUST00000189950 315 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44456-201ENSMUST00000196554 89 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43739-201ENSMUST00000198294 307 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm45173-201ENSMUST00000206819 305 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm18488-201ENSMUST00000215082 364 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.29□□□□□ -1.56
Sh3rf1Q69ZI1 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm24235-201ENSMUST00000104319 129 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm14355-201ENSMUST00000117352 264 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm9043-201ENSMUST00000119677 314 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm14333-201ENSMUST00000130484 264 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm17907-201ENSMUST00000173150 710 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm26430-201ENSMUST00000178054 107 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm28283-201ENSMUST00000185509 178 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Mir7227-201ENSMUST00000200408 59 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm2011-203ENSMUST00000203750 435 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Gm19761-201ENSMUST00000205372 391 ntBASIC5.28□□□□□ -1.56
Sh3rf1Q69ZI1 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms