Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm22803-201ENSMUST00000158049 283 ntBASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm23268-201ENSMUST00000175494 78 ntBASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm24317-201ENSMUST00000178536 107 ntBASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 AC160958.1-201ENSMUST00000224833 368 ntBASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ush2AQ2QI47 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm7327-201ENSMUST00000120925 652 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm13555-201ENSMUST00000121668 319 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm22600-201ENSMUST00000157598 269 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 AC122301.1-201ENSMUST00000219625 507 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm45264-201ENSMUST00000210090 3995 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm42483-201ENSMUST00000197556 1742 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm13438-201ENSMUST00000120100 573 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Mir200b-201ENSMUST00000083615 70 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm23010-201ENSMUST00000104151 126 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm25170-201ENSMUST00000104191 129 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm12760-201ENSMUST00000117861 482 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 AC091683.1-201ENSMUST00000222307 2446 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Gm22264-201ENSMUST00000178200 107 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ush2AQ2QI47 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 AC164092.3-201ENSMUST00000216970 1323 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm12288-201ENSMUST00000121054 1282 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm20776-201ENSMUST00000189940 700 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm25818-201ENSMUST00000083282 164 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm36969-201ENSMUST00000194551 2809 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm27991-201ENSMUST00000184804 137 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm21489-201ENSMUST00000189668 818 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm21006-201ENSMUST00000196930 667 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm6796-201ENSMUST00000211919 243 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm43886-201ENSMUST00000205039 2386 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm12568-201ENSMUST00000117362 624 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm13379-201ENSMUST00000118053 621 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm11285-201ENSMUST00000118443 322 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm10075-201ENSMUST00000162030 545 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC1.62□□□□□ -2.15
Ush2AQ2QI47 Gm5527-201ENSMUST00000179821 642 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms