Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Gjb1P28230 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.8□□□□□ -1.64
Gjb1P28230 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Gjb1P28230 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.8□□□□□ -1.64
Gjb1P28230 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Gjb1P28230 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Gjb1P28230 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Gjb1P28230 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Gjb1P28230 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Gjb1P28230 Mir208b-201ENSMUST00000104735 77 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm6429-201ENSMUST00000117144 475 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm12006-201ENSMUST00000120786 403 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm14982-201ENSMUST00000121102 442 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.79□□□□□ -1.64
Gjb1P28230 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm7438-201ENSMUST00000177664 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm7408-201ENSMUST00000178014 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm7386-201ENSMUST00000178020 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm3657-201ENSMUST00000178170 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm7415-201ENSMUST00000178205 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm7391-201ENSMUST00000178680 639 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm18185-201ENSMUST00000186725 667 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm37418-201ENSMUST00000195031 274 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm17779-201ENSMUST00000213395 394 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm18116-201ENSMUST00000220920 537 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm23925-201ENSMUST00000082471 132 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.79□□□□□ -1.64
Gjb1P28230 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Gjb1P28230 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.79□□□□□ -1.64
Gjb1P28230 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Gjb1P28230 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm22771-201ENSMUST00000104449 91 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm12433-201ENSMUST00000119659 255 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm23496-201ENSMUST00000157741 248 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm23964-201ENSMUST00000157966 107 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm17177-201ENSMUST00000169144 483 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm22120-201ENSMUST00000175590 70 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm27861-201ENSMUST00000183920 214 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Mir6996-201ENSMUST00000183922 61 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm28211-201ENSMUST00000190920 315 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm42805-201ENSMUST00000196158 276 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Gm45063-201ENSMUST00000203726 472 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.78□□□□□ -1.64
Gjb1P28230 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Gjb1P28230 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Gjb1P28230 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Gjb1P28230 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Gjb1P28230 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.77□□□□□ -1.65
Gjb1P28230 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm25376-201ENSMUST00000104340 133 ntBASIC4.77□□□□□ -1.65
Gjb1P28230 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Gjb1P28230 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Gjb1P28230 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm14282-201ENSMUST00000119484 240 ntBASIC4.77□□□□□ -1.65
Gjb1P28230 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.77□□□□□ -1.65
Gjb1P28230 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms