Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm24289-201ENSMUST00000157629 135 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Mir1946b-201ENSMUST00000157853 133 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm16569-201ENSMUST00000160526 314 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm15796-201ENSMUST00000162135 204 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm17655-201ENSMUST00000167969 255 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Sdc1P18828 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm25198-201ENSMUST00000178574 110 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.97□□□□□ -1.93
Sdc1P18828 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm27695-201ENSMUST00000184301 91 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm7634-201ENSMUST00000185778 553 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm37828-201ENSMUST00000192496 432 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm43115-201ENSMUST00000196244 160 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm19243-201ENSMUST00000198592 269 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm44656-201ENSMUST00000208428 490 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Gm20586-201ENSMUST00000210122 547 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Sdc1P18828 CR974429.1-201ENSMUST00000220877 827 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 AC131745.2-201ENSMUST00000225736 565 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Sdc1P18828 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm26439-201ENSMUST00000082592 106 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 Mir30b-201ENSMUST00000083542 96 ntBASIC2.97□□□□□ -1.93
Sdc1P18828 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Sdc1P18828 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Sdc1P18828 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Sdc1P18828 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Sdc1P18828 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Sdc1P18828 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Sdc1P18828 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sdc1P18828 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm15076-201ENSMUST00000117076 474 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm16017-201ENSMUST00000119834 208 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm11645-201ENSMUST00000121589 649 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm14695-201ENSMUST00000121721 282 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm25967-201ENSMUST00000157168 147 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm24060-201ENSMUST00000157494 95 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm28141-201ENSMUST00000186676 342 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC2.96□□□□□ -1.94
Sdc1P18828 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm28061-201ENSMUST00000189085 807 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm8823-201ENSMUST00000193158 433 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm43198-201ENSMUST00000200927 326 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm44585-201ENSMUST00000207150 607 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm45312-201ENSMUST00000210566 311 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm6842-201ENSMUST00000211361 390 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Gm18903-201ENSMUST00000215343 480 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sdc1P18828 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm22293-201ENSMUST00000083314 109 ntBASIC2.96□□□□□ -1.94
Sdc1P18828 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sdc1P18828 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Sdc1P18828 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Sdc1P18828 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 Mir667-201ENSMUST00000102441 92 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm14677-201ENSMUST00000117866 486 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm14512-201ENSMUST00000117924 230 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm15231-201ENSMUST00000119174 447 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm24113-201ENSMUST00000157477 276 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm24939-201ENSMUST00000158325 137 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm16558-201ENSMUST00000163015 532 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm22776-201ENSMUST00000178634 94 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm23767-201ENSMUST00000179278 94 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Gm27805-201ENSMUST00000184513 79 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.95□□□□□ -1.94
Sdc1P18828 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Sdc1P18828 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms