Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vti1aO89116 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Vti1aO89116 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.42□□□□□ -1.54
Vti1aO89116 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vti1aO89116 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Vti1aO89116 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm14711-201ENSMUST00000117056 217 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm15120-201ENSMUST00000120602 301 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.41□□□□□ -1.54
Vti1aO89116 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm17081-201ENSMUST00000167363 478 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm20794-201ENSMUST00000177626 628 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm28957-201ENSMUST00000190174 373 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Igkv15-97-201ENSMUST00000197637 339 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm4321-201ENSMUST00000200520 442 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm42850-201ENSMUST00000202094 201 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.41□□□□□ -1.54
Vti1aO89116 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm9068-201ENSMUST00000217393 455 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm9512-201ENSMUST00000223112 497 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm22229-201ENSMUST00000082987 108 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Gm23345-201ENSMUST00000083817 150 ntBASIC5.41□□□□□ -1.54
Vti1aO89116 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.41□□□□□ -1.54
Vti1aO89116 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vti1aO89116 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vti1aO89116 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm14385-201ENSMUST00000116315 876 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm14995-201ENSMUST00000117135 391 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm14086-201ENSMUST00000117152 173 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm11322-201ENSMUST00000118095 435 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm12328-201ENSMUST00000118611 197 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm14240-201ENSMUST00000120353 546 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm11904-201ENSMUST00000120562 248 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm25335-201ENSMUST00000158043 103 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm23925-202ENSMUST00000188429 132 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm2497-201ENSMUST00000189539 601 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm29332-201ENSMUST00000190829 227 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm5552-201ENSMUST00000197149 515 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm42758-201ENSMUST00000202146 283 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm43976-201ENSMUST00000203637 235 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm44687-201ENSMUST00000204975 235 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm44820-201ENSMUST00000207420 396 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.4□□□□□ -1.54
Vti1aO89116 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.4□□□□□ -1.54
Vti1aO89116 Gm31849-201ENSMUST00000220306 375 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 Gm7753-201ENSMUST00000221007 867 ntBASIC5.4□□□□□ -1.54
Vti1aO89116 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms