Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 4930425K24Rik-201ENSMUST00000222054 2143 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm37347-201ENSMUST00000193969 3071 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm18337-201ENSMUST00000219023 5762 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm9860-201ENSMUST00000211426 3653 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Tango6-201ENSMUST00000048359 4409 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Mir760-201ENSMUST00000103257 119 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm24122-201ENSMUST00000104107 132 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm24257-201ENSMUST00000104472 131 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm25344-201ENSMUST00000104503 132 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm22953-201ENSMUST00000116724 101 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm9266-201ENSMUST00000117401 484 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm12683-201ENSMUST00000117528 415 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Tma7-ps-201ENSMUST00000118448 195 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm12901-201ENSMUST00000118690 532 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm13314-201ENSMUST00000118742 335 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm12993-201ENSMUST00000119900 479 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm14687-201ENSMUST00000120206 363 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Mir1899-201ENSMUST00000122798 96 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm2709-201ENSMUST00000142979 350 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm25966-201ENSMUST00000157169 117 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm23077-201ENSMUST00000157854 116 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm22518-201ENSMUST00000158267 68 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm22165-201ENSMUST00000158414 103 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm26211-201ENSMUST00000158578 129 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Gm16561-201ENSMUST00000163001 192 ntBASIC1.07□□□□□ -2.24
Gm4559A4IF42 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms