Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm6893-201ENSMUST00000118385 522 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm11285-201ENSMUST00000118443 322 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm16060-201ENSMUST00000153140 478 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm3851-201ENSMUST00000168653 318 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm28685-201ENSMUST00000187545 1101 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm17916-202ENSMUST00000187634 1187 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm38214-201ENSMUST00000192581 988 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm42502-201ENSMUST00000198550 1089 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm42818-201ENSMUST00000198869 987 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Gm25480-201ENSMUST00000083217 133 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smco4Q9JIS3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.37□□□□□ -2.03
Smco4Q9JIS3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Mir551b-201ENSMUST00000102165 98 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm14579-201ENSMUST00000117068 283 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm14142-201ENSMUST00000117833 296 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm14581-201ENSMUST00000121726 198 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm16274-201ENSMUST00000139251 592 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm15974-201ENSMUST00000159103 531 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm21893-201ENSMUST00000179119 397 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Mir6410-201ENSMUST00000184204 104 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm44223-201ENSMUST00000204854 114 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm44972-201ENSMUST00000206419 406 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm12582-201ENSMUST00000030555 697 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm4987-201ENSMUST00000078326 408 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Snord35b-201ENSMUST00000082833 87 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm10704-201ENSMUST00000098952 730 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Smco4Q9JIS3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm24987-201ENSMUST00000104453 134 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm11433-201ENSMUST00000118318 228 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm14975-201ENSMUST00000118741 664 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm13460-201ENSMUST00000121274 353 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm12685-201ENSMUST00000121702 214 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm6155-201ENSMUST00000173735 341 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Snord53-201ENSMUST00000175146 78 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm24561-201ENSMUST00000175182 95 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm11394-201ENSMUST00000181421 517 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm38201-201ENSMUST00000192143 387 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm37791-201ENSMUST00000195081 286 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm19620-201ENSMUST00000195972 434 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm42621-201ENSMUST00000198114 275 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.35□□□□□ -2.03
Smco4Q9JIS3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Smco4Q9JIS3 AC154368.2-201ENSMUST00000222334 1724 ntBASIC2.34□□□□□ -2.03
Smco4Q9JIS3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Smco4Q9JIS3 Gm15075-201ENSMUST00000122187 477 ntBASIC2.34□□□□□ -2.03
Smco4Q9JIS3 Gm24720-201ENSMUST00000157518 166 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms