Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm38150-201ENSMUST00000192996 452 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm43739-201ENSMUST00000198294 307 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm43233-201ENSMUST00000200491 616 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Rpa1Q8VEE4 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Snora35-201ENSMUST00000104579 128 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm15660-201ENSMUST00000118997 478 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm15237-201ENSMUST00000122104 469 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm22718-201ENSMUST00000122701 315 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm25291-201ENSMUST00000122795 144 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm23233-201ENSMUST00000157301 137 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm22891-201ENSMUST00000158641 164 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm26024-201ENSMUST00000158657 322 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm22326-201ENSMUST00000158897 351 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm18199-201ENSMUST00000173820 835 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm27781-201ENSMUST00000185185 92 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Mir6516-201ENSMUST00000196236 110 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm42832-201ENSMUST00000196361 745 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm44336-201ENSMUST00000203696 468 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm23737-201ENSMUST00000082547 159 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Rpa1Q8VEE4 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm11936-201ENSMUST00000118323 160 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm7953-201ENSMUST00000168278 469 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm17086-201ENSMUST00000171346 484 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm24300-201ENSMUST00000177809 109 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm24017-201ENSMUST00000178726 109 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm23952-201ENSMUST00000179380 109 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm24949-201ENSMUST00000183609 215 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm29350-201ENSMUST00000189141 541 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm36934-201ENSMUST00000192007 306 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm2147-201ENSMUST00000193588 639 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Gm44092-201ENSMUST00000204470 258 ntBASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rpa1Q8VEE4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms